PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.L03532.1.p
Common NameEUGRSUZ_I00422, LOC104418258
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 316aa    MW: 35479.9 Da    PI: 6.597
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.L03532.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.6e-21150199255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  Eucgr.L03532.1.p 150 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDEAAYKLRG 199
                       59******9.**********965...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.47E-34149207No hitNo description
PROSITE profilePS5103223.103150207IPR001471AP2/ERF domain
SMARTSM003801.8E-36150213IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-23150209IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.2E-32150209IPR001471AP2/ERF domain
PfamPF008478.8E-15151199IPR001471AP2/ERF domain
PRINTSPR003672.8E-11151162IPR001471AP2/ERF domain
PRINTSPR003672.8E-11173189IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MAAAVEFYNS NSDPIREEFM KALEPFMKSV SPVSSPLSSL SSCDSVFPQQ QPNLNPDLCS  60
SWILNPMGLE QSGSIGLNRL SHSQIQHIQD EMLLRRQNQE LWLASAMKSP LQHEKFDQCR  120
HQNHHGSPHL LRPKALPMKR VGVPPKPNKL YRGVRQRHWG KWVAEIRLPK NRTRLWLGTF  180
DTAEEAALAY DEAAYKLRGD FARLNFPRSR DGGSYLCDYN PLHSSVCAKL QAICQSLAAN  240
SQKQGKTGEP CFFPDRAMET FDAATEADED YKVENSVSSP AFSDESSVAG SSSPESNLAL  300
LGFPPSQFEI ENFYLE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-21149207160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
3gcc_A6e-21149213469ATERF1
2gcc_A6e-21149213469ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010027841.10.0PREDICTED: ethylene-responsive transcription factor ERF060
RefseqXP_010042789.10.0PREDICTED: ethylene-responsive transcription factor ERF060-like, partial
TrEMBLA0A059AL600.0A0A059AL60_EUCGR; Uncharacterized protein
STRINGPOPTR_0007s05690.11e-79(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM26802768
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.12e-49ERF family protein